It was revealed earlier today that Nintendo has refused to allow The Binding of Isaac on the 3DS eShop. Team Meat's Edward McMillen tells Joystiq it's "a bit primitive to 'censor' something due to religion, but it's [Nintendo's] platform and their choice on what they want to support." He also noted on Twitter that the decision hasn't soured the team's relationship with Nintendo, and that it "won't effect any future games with them."
McMillen said Team Meat and its publisher are looking into bringing the game to "1-2 Sony platforms," while Team Meat's publisher determines if such a port is worth pursuing. And hey, didn't Sony just bring out some new thing with two analog sticks?